Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
RAE1P78406 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAE1P78406 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.96□□□□□ -0.17
RAE1P78406 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 AL359881.3-201ENST00000602640 1721 ntBASIC13.96□□□□□ -0.17
RAE1P78406 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 AL136309.1-201ENST00000403917 691 ntBASIC13.96□□□□□ -0.17
RAE1P78406 MIR1202-201ENST00000408529 83 ntBASIC13.96□□□□□ -0.17
RAE1P78406 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.96□□□□□ -0.17
RAE1P78406 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAE1P78406 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.96□□□□□ -0.17
RAE1P78406 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.96□□□□□ -0.17
RAE1P78406 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.96□□□□□ -0.17
RAE1P78406 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.96□□□□□ -0.17
RAE1P78406 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.96□□□□□ -0.17
RAE1P78406 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RAE1P78406 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.96□□□□□ -0.17
RAE1P78406 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.96□□□□□ -0.17
RAE1P78406 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.96□□□□□ -0.17
RAE1P78406 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.96□□□□□ -0.17
RAE1P78406 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.96□□□□□ -0.17
RAE1P78406 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.96□□□□□ -0.17
RAE1P78406 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.96□□□□□ -0.17
RAE1P78406 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.96□□□□□ -0.17
RAE1P78406 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.96□□□□□ -0.17
RAE1P78406 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.96□□□□□ -0.17
RAE1P78406 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.96□□□□□ -0.17
RAE1P78406 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAE1P78406 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.96□□□□□ -0.17
RAE1P78406 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAE1P78406 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RAE1P78406 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.96□□□□□ -0.18
RAE1P78406 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.96□□□□□ -0.18
RAE1P78406 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAE1P78406 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAE1P78406 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RAE1P78406 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAE1P78406 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAE1P78406 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RAE1P78406 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAE1P78406 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAE1P78406 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RAE1P78406 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RAE1P78406 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 AC010327.5-201ENST00000586923 3061 ntBASIC13.95□□□□□ -0.18
RAE1P78406 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.95□□□□□ -0.18
RAE1P78406 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 KRT8P4-201ENST00000509735 1454 ntBASIC13.95□□□□□ -0.18
RAE1P78406 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RAE1P78406 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RAE1P78406 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.95□□□□□ -0.18
RAE1P78406 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAE1P78406 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.95□□□□□ -0.18
RAE1P78406 CHMP1AP1-201ENST00000445563 662 ntBASIC13.95□□□□□ -0.18
RAE1P78406 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.95□□□□□ -0.18
RAE1P78406 CROCCP4-201ENST00000457096 498 ntBASIC13.95□□□□□ -0.18
RAE1P78406 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.95□□□□□ -0.18
RAE1P78406 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms