Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
RPL39P62891 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 AC004241.5-201ENST00000623870 2448 ntBASIC10.49□□□□□ -0.73
RPL39P62891 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 AL445209.1-201ENST00000607269 3491 ntBASIC10.49□□□□□ -0.73
RPL39P62891 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.49□□□□□ -0.73
RPL39P62891 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
RPL39P62891 AL627223.1-201ENST00000416693 442 ntBASIC10.49□□□□□ -0.73
RPL39P62891 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 HTR5BP-201ENST00000430851 1154 ntBASIC10.49□□□□□ -0.73
RPL39P62891 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.49□□□□□ -0.73
RPL39P62891 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC10.49□□□□□ -0.73
RPL39P62891 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.49□□□□□ -0.73
RPL39P62891 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.49□□□□□ -0.73
RPL39P62891 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 MIR6080-201ENST00000617359 66 ntBASIC10.49□□□□□ -0.73
RPL39P62891 AC105339.1-204ENST00000636249 355 ntBASIC10.49□□□□□ -0.73
RPL39P62891 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 HSPA8P5-201ENST00000456928 2069 ntBASIC10.49□□□□□ -0.73
RPL39P62891 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RPL39P62891 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.49□□□□□ -0.73
RPL39P62891 AL591122.2-201ENST00000624125 1853 ntBASIC10.49□□□□□ -0.73
RPL39P62891 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RPL39P62891 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms