Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 AC011700.1-201ENST00000610409 2627 ntBASIC13.28□□□□□ -0.28
VBP1P61758 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 AC106818.1-201ENST00000623223 3242 ntBASIC13.28□□□□□ -0.28
VBP1P61758 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
VBP1P61758 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.28□□□□□ -0.28
VBP1P61758 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 AL137783.1-201ENST00000623494 1896 ntBASIC13.28□□□□□ -0.28
VBP1P61758 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 FO393414.2-201ENST00000405153 598 ntBASIC13.28□□□□□ -0.28
VBP1P61758 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.28□□□□□ -0.28
VBP1P61758 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.28□□□□□ -0.28
VBP1P61758 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.28□□□□□ -0.28
VBP1P61758 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 AC099522.2-201ENST00000607001 744 ntBASIC13.28□□□□□ -0.28
VBP1P61758 AC004877.2-201ENST00000623941 599 ntBASIC13.28□□□□□ -0.28
VBP1P61758 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.28□□□□□ -0.28
VBP1P61758 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
VBP1P61758 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.28□□□□□ -0.28
VBP1P61758 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 LINC00567-201ENST00000569854 3409 ntBASIC13.28□□□□□ -0.28
VBP1P61758 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
VBP1P61758 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.28□□□□□ -0.28
VBP1P61758 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
VBP1P61758 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
VBP1P61758 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VBP1P61758 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.28□□□□□ -0.28
VBP1P61758 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
VBP1P61758 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.27□□□□□ -0.28
VBP1P61758 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.27□□□□□ -0.28
VBP1P61758 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
VBP1P61758 AC005014.1-201ENST00000432006 2976 ntBASIC13.27□□□□□ -0.28
VBP1P61758 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
VBP1P61758 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.27□□□□□ -0.28
VBP1P61758 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
VBP1P61758 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.27□□□□□ -0.28
VBP1P61758 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
VBP1P61758 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.27□□□□□ -0.29
VBP1P61758 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
VBP1P61758 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
VBP1P61758 AC002056.1-201ENST00000395613 760 ntBASIC13.27□□□□□ -0.29
VBP1P61758 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.27□□□□□ -0.29
VBP1P61758 AC074338.1-201ENST00000416825 156 ntBASIC13.27□□□□□ -0.29
VBP1P61758 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.27□□□□□ -0.29
VBP1P61758 KRT18P64-201ENST00000434946 1219 ntBASIC13.27□□□□□ -0.29
VBP1P61758 AC018712.1-201ENST00000455767 687 ntBASIC13.27□□□□□ -0.29
VBP1P61758 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms