Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 AL512384.1-201ENST00000406683 331 ntBASIC13.04□□□□□ -0.32
SEC61A1P61619 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 FAM86LP-201ENST00000478302 853 ntBASIC13.04□□□□□ -0.32
SEC61A1P61619 GIMAP3P-201ENST00000495150 836 ntBASIC13.04□□□□□ -0.32
SEC61A1P61619 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.04□□□□□ -0.32
SEC61A1P61619 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.04□□□□□ -0.32
SEC61A1P61619 AC092552.1-201ENST00000547243 906 ntBASIC13.04□□□□□ -0.32
SEC61A1P61619 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SEC61A1P61619 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61A1P61619 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
SEC61A1P61619 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SEC61A1P61619 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SEC61A1P61619 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SEC61A1P61619 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61A1P61619 TMEM14DP-201ENST00000422205 345 ntBASIC13.03□□□□□ -0.32
SEC61A1P61619 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SEC61A1P61619 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.03□□□□□ -0.32
SEC61A1P61619 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.03□□□□□ -0.32
SEC61A1P61619 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.03□□□□□ -0.32
SEC61A1P61619 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61A1P61619 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.03□□□□□ -0.32
SEC61A1P61619 TMEM261P1-201ENST00000604899 340 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms