Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 AL451050.2-201ENST00000606967 682 ntBASIC15.04■□□□□ -0
CDH4P55283 AC244093.1-201ENST00000610837 814 ntBASIC15.04■□□□□ -0
CDH4P55283 MIR6787-201ENST00000616675 61 ntBASIC15.04■□□□□ -0
CDH4P55283 GPR182-203ENST00000622922 591 ntBASIC15.04■□□□□ -0
CDH4P55283 AC244452.3-201ENST00000636814 210 ntBASIC15.04■□□□□ -0
CDH4P55283 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 AL161772.1-201ENST00000610494 4412 ntBASIC15.03■□□□□ -0
CDH4P55283 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.03■□□□□ -0
CDH4P55283 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 AC144522.1-201ENST00000625111 1658 ntBASIC15.03■□□□□ -0
CDH4P55283 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CDH4P55283 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH4P55283 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH4P55283 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH4P55283 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.03■□□□□ -0
CDH4P55283 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.03■□□□□ -0
CDH4P55283 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.03■□□□□ -0
CDH4P55283 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.03■□□□□ -0
CDH4P55283 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.03■□□□□ -0
CDH4P55283 HLA-J-204ENST00000495278 958 ntBASIC15.03■□□□□ -0
CDH4P55283 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.03■□□□□ -0
CDH4P55283 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 AC013355.1-201ENST00000562625 723 ntBASIC15.03■□□□□ -0
CDH4P55283 MIR3615-201ENST00000581999 87 ntBASIC15.03■□□□□ -0
CDH4P55283 AC020914.3-201ENST00000594712 304 ntBASIC15.03■□□□□ -0
CDH4P55283 AC090164.2-201ENST00000611487 516 ntBASIC15.03■□□□□ -0
CDH4P55283 MIR6074-201ENST00000612054 107 ntBASIC15.03■□□□□ -0
CDH4P55283 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.03■□□□□ -0
CDH4P55283 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.03■□□□□ -0
CDH4P55283 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH4P55283 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.03■□□□□ -0
CDH4P55283 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH4P55283 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH4P55283 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH4P55283 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDH4P55283 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CDH4P55283 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.03■□□□□ -0
CDH4P55283 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.02■□□□□ -0
CDH4P55283 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.02■□□□□ -0
CDH4P55283 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CDH4P55283 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.02■□□□□ -0
CDH4P55283 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDH4P55283 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.02■□□□□ -0
CDH4P55283 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CDH4P55283 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CDH4P55283 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH4P55283 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.02■□□□□ -0
CDH4P55283 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDH4P55283 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.02■□□□□ -0
CDH4P55283 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.02■□□□□ -0
CDH4P55283 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.02■□□□□ -0
CDH4P55283 AC104073.2-201ENST00000453737 312 ntBASIC15.02■□□□□ -0
CDH4P55283 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.02■□□□□ -0
CDH4P55283 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.02■□□□□ -0
CDH4P55283 AC006122.1-201ENST00000493323 440 ntBASIC15.02■□□□□ -0
CDH4P55283 SCARNA21-201ENST00000517026 139 ntBASIC15.02■□□□□ -0
CDH4P55283 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.02■□□□□ -0
CDH4P55283 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.02■□□□□ -0
CDH4P55283 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.02■□□□□ -0
CDH4P55283 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CDH4P55283 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.02■□□□□ -0
CDH4P55283 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.02■□□□□ -0
CDH4P55283 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms