Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.52□□□□□ -0.08
GTF2A1P52655 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
GTF2A1P52655 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GTF2A1P52655 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.52□□□□□ -0.08
GTF2A1P52655 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.52□□□□□ -0.08
GTF2A1P52655 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.52□□□□□ -0.09
GTF2A1P52655 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.52□□□□□ -0.09
GTF2A1P52655 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.52□□□□□ -0.09
GTF2A1P52655 AC106795.1-205ENST00000512851 1056 ntBASIC14.52□□□□□ -0.09
GTF2A1P52655 AC107918.2-201ENST00000530817 355 ntBASIC14.52□□□□□ -0.09
GTF2A1P52655 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
GTF2A1P52655 AC087641.1-201ENST00000557561 1021 ntBASIC14.52□□□□□ -0.09
GTF2A1P52655 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
GTF2A1P52655 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.52□□□□□ -0.09
GTF2A1P52655 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
GTF2A1P52655 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.52□□□□□ -0.09
GTF2A1P52655 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GTF2A1P52655 AC138894.3-201ENST00000603787 634 ntBASIC14.52□□□□□ -0.09
GTF2A1P52655 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 AC020765.3-201ENST00000613051 740 ntBASIC14.52□□□□□ -0.09
GTF2A1P52655 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.52□□□□□ -0.09
GTF2A1P52655 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
GTF2A1P52655 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.52□□□□□ -0.09
GTF2A1P52655 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.52□□□□□ -0.09
GTF2A1P52655 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.52□□□□□ -0.09
GTF2A1P52655 AC018892.3-201ENST00000623986 2499 ntBASIC14.52□□□□□ -0.09
GTF2A1P52655 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GTF2A1P52655 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GTF2A1P52655 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
GTF2A1P52655 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GTF2A1P52655 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 AL132642.2-201ENST00000623423 1998 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
GTF2A1P52655 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 AC003958.1-201ENST00000435883 421 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.51□□□□□ -0.09
GTF2A1P52655 AC139887.3-201ENST00000568585 713 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.51□□□□□ -0.09
GTF2A1P52655 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.51□□□□□ -0.09
GTF2A1P52655 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 NPAP1P7-201ENST00000613027 823 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GTF2A1P52655 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 AC004706.3-202ENST00000621574 984 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 AL139288.1-201ENST00000623748 933 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.51□□□□□ -0.09
GTF2A1P52655 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 TNKS-213ENST00000522110 2900 ntBASIC14.51□□□□□ -0.09
GTF2A1P52655 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GTF2A1P52655 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.51□□□□□ -0.09
GTF2A1P52655 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GTF2A1P52655 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.5□□□□□ -0.09
GTF2A1P52655 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 PTPRVP-205ENST00000641549 5067 ntBASIC14.5□□□□□ -0.09
GTF2A1P52655 MAX-212ENST00000555932 1673 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms