Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HTTP42858 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HTTP42858 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 RPL18AP16-201ENST00000424057 531 ntBASIC15.99■□□□□ 0.15
HTTP42858 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HTTP42858 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HTTP42858 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 LAP3P2-201ENST00000454686 1454 ntBASIC15.99■□□□□ 0.15
HTTP42858 AC007952.5-201ENST00000572818 1486 ntBASIC15.99■□□□□ 0.15
HTTP42858 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 AL365203.3-201ENST00000609742 2057 ntBASIC15.99■□□□□ 0.15
HTTP42858 AC092573.1-201ENST00000433054 884 ntBASIC15.99■□□□□ 0.15
HTTP42858 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC15.99■□□□□ 0.15
HTTP42858 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 AP001462.1-201ENST00000594089 452 ntBASIC15.99■□□□□ 0.15
HTTP42858 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC15.99■□□□□ 0.15
HTTP42858 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.99■□□□□ 0.15
HTTP42858 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.99■□□□□ 0.15
HTTP42858 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC15.99■□□□□ 0.15
HTTP42858 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
HTTP42858 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC15.99■□□□□ 0.15
HTTP42858 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HTTP42858 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.99■□□□□ 0.15
HTTP42858 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.99■□□□□ 0.15
HTTP42858 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HTTP42858 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.99■□□□□ 0.15
HTTP42858 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
HTTP42858 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.98■□□□□ 0.15
HTTP42858 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.98■□□□□ 0.15
HTTP42858 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HTTP42858 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
HTTP42858 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC15.98■□□□□ 0.15
HTTP42858 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC15.98■□□□□ 0.15
HTTP42858 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.98■□□□□ 0.15
HTTP42858 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.98■□□□□ 0.15
HTTP42858 AP005264.5-201ENST00000590066 467 ntBASIC15.98■□□□□ 0.15
HTTP42858 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.98■□□□□ 0.15
HTTP42858 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.98■□□□□ 0.15
HTTP42858 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HTTP42858 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HTTP42858 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HTTP42858 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HTTP42858 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.98■□□□□ 0.15
HTTP42858 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.98■□□□□ 0.15
HTTP42858 AP000920.1-201ENST00000531824 344 ntBASIC15.98■□□□□ 0.15
HTTP42858 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.98■□□□□ 0.15
HTTP42858 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.98■□□□□ 0.15
HTTP42858 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.98■□□□□ 0.15
HTTP42858 FAM226B-201ENST00000602508 1490 ntBASIC15.98■□□□□ 0.15
HTTP42858 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HTTP42858 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.97■□□□□ 0.15
HTTP42858 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC15.97■□□□□ 0.15
HTTP42858 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.97■□□□□ 0.15
HTTP42858 AC004923.3-201ENST00000527532 355 ntBASIC15.97■□□□□ 0.15
HTTP42858 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC15.97■□□□□ 0.15
HTTP42858 AC145285.5-201ENST00000562217 361 ntBASIC15.97■□□□□ 0.15
HTTP42858 URAHP-205ENST00000610227 398 ntBASIC15.97■□□□□ 0.15
HTTP42858 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.97■□□□□ 0.15
HTTP42858 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
HTTP42858 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HTTP42858 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HTTP42858 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms