Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 AC006504.5-208ENST00000588784 2401 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 LINC01815-202ENST00000641468 1409 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 AL596257.1-201ENST00000641463 2694 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL15A1P39059 AC011270.2-201ENST00000624293 2550 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 GUSBP10-201ENST00000417412 665 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 AC138701.2-201ENST00000553634 226 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.42■□□□□ 0.54
COL15A1P39059 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.42■□□□□ 0.54
COL15A1P39059 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COL15A1P39059 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.41■□□□□ 0.54
COL15A1P39059 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.41■□□□□ 0.54
COL15A1P39059 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.41■□□□□ 0.54
COL15A1P39059 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.41■□□□□ 0.54
COL15A1P39059 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL15A1P39059 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.41■□□□□ 0.54
COL15A1P39059 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.41■□□□□ 0.54
COL15A1P39059 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.41■□□□□ 0.54
COL15A1P39059 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COL15A1P39059 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.41■□□□□ 0.54
COL15A1P39059 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 AC092580.1-201ENST00000433998 658 ntBASIC18.41■□□□□ 0.54
COL15A1P39059 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.41■□□□□ 0.54
COL15A1P39059 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COL15A1P39059 AC092638.2-201ENST00000441105 947 ntBASIC18.41■□□□□ 0.54
COL15A1P39059 AC026410.1-201ENST00000507366 1101 ntBASIC18.41■□□□□ 0.54
COL15A1P39059 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 MIR5196-201ENST00000578146 115 ntBASIC18.41■□□□□ 0.54
COL15A1P39059 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.41■□□□□ 0.54
COL15A1P39059 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.41■□□□□ 0.54
COL15A1P39059 AC005357.2-202ENST00000590507 1060 ntBASIC18.41■□□□□ 0.54
COL15A1P39059 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.41■□□□□ 0.54
COL15A1P39059 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL15A1P39059 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.4■□□□□ 0.54
COL15A1P39059 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL15A1P39059 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL15A1P39059 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 FGD5P1-202ENST00000614866 2498 ntBASIC18.4■□□□□ 0.54
COL15A1P39059 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.4■□□□□ 0.54
COL15A1P39059 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.4■□□□□ 0.54
COL15A1P39059 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COL15A1P39059 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.4■□□□□ 0.54
COL15A1P39059 MIR645-201ENST00000385283 94 ntBASIC18.4■□□□□ 0.54
COL15A1P39059 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL15A1P39059 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.4■□□□□ 0.54
COL15A1P39059 AC073869.2-201ENST00000417338 1026 ntBASIC18.4■□□□□ 0.54
COL15A1P39059 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms