Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 AC009477.1-201ENST00000452936 217 ntBASIC12.57□□□□□ -0.4
HIST1H1DP16402 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 AC025678.2-201ENST00000562061 970 ntBASIC12.57□□□□□ -0.4
HIST1H1DP16402 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 AC007431.3-201ENST00000623221 587 ntBASIC12.57□□□□□ -0.4
HIST1H1DP16402 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 AC111170.3-201ENST00000624282 2464 ntBASIC12.57□□□□□ -0.4
HIST1H1DP16402 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 FAM90A12P-201ENST00000519497 2375 ntBASIC12.57□□□□□ -0.4
HIST1H1DP16402 FAM90A24P-201ENST00000520792 2369 ntBASIC12.57□□□□□ -0.4
HIST1H1DP16402 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 AC097493.3-201ENST00000509725 367 ntBASIC12.56□□□□□ -0.4
HIST1H1DP16402 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 AC131206.1-201ENST00000538078 1211 ntBASIC12.56□□□□□ -0.4
HIST1H1DP16402 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H1DP16402 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H1DP16402 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms