Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APOEP02649 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APOEP02649 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
APOEP02649 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 AC003102.2-201ENST00000589195 1469 ntBASIC15.52■□□□□ 0.08
APOEP02649 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 AC139749.1-202ENST00000617529 3139 ntBASIC15.52■□□□□ 0.08
APOEP02649 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
APOEP02649 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.52■□□□□ 0.08
APOEP02649 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 GRK6P1-201ENST00000400595 1711 ntBASIC15.52■□□□□ 0.08
APOEP02649 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.52■□□□□ 0.08
APOEP02649 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 AC067750.1-201ENST00000608826 6545 ntBASIC15.52■□□□□ 0.08
APOEP02649 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
APOEP02649 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
APOEP02649 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.52■□□□□ 0.08
APOEP02649 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.52■□□□□ 0.08
APOEP02649 C2orf69P2-201ENST00000562032 1123 ntBASIC15.52■□□□□ 0.08
APOEP02649 PPY2P-201ENST00000582808 702 ntBASIC15.52■□□□□ 0.08
APOEP02649 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.52■□□□□ 0.08
APOEP02649 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 AC073413.1-201ENST00000603927 732 ntBASIC15.52■□□□□ 0.08
APOEP02649 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APOEP02649 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.52■□□□□ 0.07
APOEP02649 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
APOEP02649 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
APOEP02649 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.52■□□□□ 0.07
APOEP02649 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
APOEP02649 AC126335.2-201ENST00000623362 4637 ntBASIC15.52■□□□□ 0.07
APOEP02649 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
APOEP02649 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
APOEP02649 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.51■□□□□ 0.07
APOEP02649 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.51■□□□□ 0.07
APOEP02649 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 AL136309.1-201ENST00000403917 691 ntBASIC15.51■□□□□ 0.07
APOEP02649 RN7SKP175-201ENST00000408472 289 ntBASIC15.51■□□□□ 0.07
APOEP02649 AC004945.1-201ENST00000416738 983 ntBASIC15.51■□□□□ 0.07
APOEP02649 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 AL355994.2-201ENST00000447882 704 ntBASIC15.51■□□□□ 0.07
APOEP02649 AP003171.2-201ENST00000528208 925 ntBASIC15.51■□□□□ 0.07
APOEP02649 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.51■□□□□ 0.07
APOEP02649 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 AC009542.2-202ENST00000619004 1067 ntBASIC15.51■□□□□ 0.07
APOEP02649 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.51■□□□□ 0.07
APOEP02649 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 KRT8P4-201ENST00000509735 1454 ntBASIC15.51■□□□□ 0.07
APOEP02649 AC104581.4-201ENST00000623126 3052 ntBASIC15.51■□□□□ 0.07
APOEP02649 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms