Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ZNF253O75346 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.6□□□□□ -0.55
ZNF253O75346 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ZNF253O75346 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.6□□□□□ -0.55
ZNF253O75346 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 AL022342.1-201ENST00000400363 863 ntBASIC11.6□□□□□ -0.55
ZNF253O75346 RPL37AP1-201ENST00000412502 279 ntBASIC11.6□□□□□ -0.55
ZNF253O75346 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.6□□□□□ -0.55
ZNF253O75346 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.6□□□□□ -0.55
ZNF253O75346 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.6□□□□□ -0.55
ZNF253O75346 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.6□□□□□ -0.55
ZNF253O75346 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 AF228730.6-201ENST00000641497 218 ntBASIC11.6□□□□□ -0.55
ZNF253O75346 AC084121.3-201ENST00000641716 218 ntBASIC11.6□□□□□ -0.55
ZNF253O75346 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 AC073869.1-201ENST00000415574 2762 ntBASIC11.6□□□□□ -0.55
ZNF253O75346 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.6□□□□□ -0.55
ZNF253O75346 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.6□□□□□ -0.55
ZNF253O75346 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
ZNF253O75346 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 AL360270.3-201ENST00000609118 1348 ntBASIC11.6□□□□□ -0.55
ZNF253O75346 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ZNF253O75346 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ZNF253O75346 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.59□□□□□ -0.55
ZNF253O75346 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.59□□□□□ -0.55
ZNF253O75346 AC055811.4-201ENST00000624039 1754 ntBASIC11.59□□□□□ -0.55
ZNF253O75346 AC018529.2-202ENST00000611482 3087 ntBASIC11.59□□□□□ -0.55
ZNF253O75346 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.59□□□□□ -0.55
ZNF253O75346 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
ZNF253O75346 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.59□□□□□ -0.55
ZNF253O75346 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ZNF253O75346 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.59□□□□□ -0.55
ZNF253O75346 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ZNF253O75346 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ZNF253O75346 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ZNF253O75346 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
ZNF253O75346 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
ZNF253O75346 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.59□□□□□ -0.55
ZNF253O75346 ZNF890P-202ENST00000530367 1156 ntBASIC11.59□□□□□ -0.55
ZNF253O75346 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 AC069262.1-201ENST00000539058 672 ntBASIC11.59□□□□□ -0.55
ZNF253O75346 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.59□□□□□ -0.55
ZNF253O75346 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ZNF253O75346 LINC01115-203ENST00000606068 577 ntBASIC11.59□□□□□ -0.55
ZNF253O75346 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.59□□□□□ -0.55
ZNF253O75346 AC004461.2-201ENST00000629517 803 ntBASIC11.59□□□□□ -0.55
ZNF253O75346 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ZNF253O75346 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
ZNF253O75346 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms