Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SNAI2O43623 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
SNAI2O43623 AC018665.1-201ENST00000622927 1362 ntBASIC11.15□□□□□ -0.63
SNAI2O43623 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
SNAI2O43623 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SNAI2O43623 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.15□□□□□ -0.63
SNAI2O43623 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SNAI2O43623 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 AL121723.1-201ENST00000445194 1519 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.14□□□□□ -0.63
SNAI2O43623 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 TOMM22P5-201ENST00000416399 439 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 RPL13P2-201ENST00000440687 659 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
SNAI2O43623 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.14□□□□□ -0.63
SNAI2O43623 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.14□□□□□ -0.63
SNAI2O43623 AC025048.3-201ENST00000590609 569 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 AC003101.2-201ENST00000612557 442 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
SNAI2O43623 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 AC005702.4-201ENST00000618393 416 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 C20orf181-201ENST00000623918 480 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 AL354702.1-201ENST00000442006 1960 ntBASIC11.14□□□□□ -0.63
SNAI2O43623 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SNAI2O43623 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.14□□□□□ -0.63
SNAI2O43623 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.14□□□□□ -0.63
SNAI2O43623 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 AC092117.1-201ENST00000621230 3250 ntBASIC11.13□□□□□ -0.63
SNAI2O43623 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms