Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
O00370 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.78■□□□□ 0.12
O00370 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
O00370 AL136172.1-201ENST00000598590 1394 ntBASIC15.77■□□□□ 0.12
O00370 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
O00370 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.77■□□□□ 0.12
O00370 MRPL37P1-201ENST00000592451 1337 ntBASIC15.77■□□□□ 0.12
O00370 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.77■□□□□ 0.12
O00370 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 AL136309.1-201ENST00000403917 691 ntBASIC15.77■□□□□ 0.12
O00370 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.77■□□□□ 0.12
O00370 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.77■□□□□ 0.12
O00370 PPY2P-201ENST00000582808 702 ntBASIC15.77■□□□□ 0.12
O00370 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
O00370 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.77■□□□□ 0.12
O00370 ZACNP1-201ENST00000612259 710 ntBASIC15.77■□□□□ 0.12
O00370 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.77■□□□□ 0.12
O00370 AC002472.3-201ENST00000640124 621 ntBASIC15.77■□□□□ 0.12
O00370 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
O00370 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
O00370 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
O00370 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
O00370 AC136759.1-202ENST00000530858 2194 ntBASIC15.77■□□□□ 0.11
O00370 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
O00370 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.77■□□□□ 0.11
O00370 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
O00370 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.77■□□□□ 0.11
O00370 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
O00370 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
O00370 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.77■□□□□ 0.11
O00370 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
O00370 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
O00370 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
O00370 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.76■□□□□ 0.11
O00370 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
O00370 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
O00370 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
O00370 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.76■□□□□ 0.11
O00370 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.76■□□□□ 0.11
O00370 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 CHMP1AP1-201ENST00000445563 662 ntBASIC15.76■□□□□ 0.11
O00370 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.76■□□□□ 0.11
O00370 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.76■□□□□ 0.11
O00370 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.76■□□□□ 0.11
O00370 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.76■□□□□ 0.11
O00370 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.76■□□□□ 0.11
O00370 AP001002.3-201ENST00000623482 206 ntBASIC15.76■□□□□ 0.11
O00370 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.76■□□□□ 0.11
O00370 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.76■□□□□ 0.11
O00370 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 KRT8P4-201ENST00000509735 1454 ntBASIC15.76■□□□□ 0.11
O00370 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
O00370 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
O00370 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 HSPA7-201ENST00000445535 1927 ntBASIC15.76■□□□□ 0.11
O00370 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
O00370 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
O00370 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.75■□□□□ 0.11
O00370 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.75■□□□□ 0.11
O00370 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms