Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK1AO00322 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC007389.4-201ENST00000454674 793 ntBASIC14.01□□□□□ -0.17
UPK1AO00322 INE1-201ENST00000456273 945 ntBASIC14.01□□□□□ -0.17
UPK1AO00322 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK1AO00322 AP001889.1-201ENST00000525414 633 ntBASIC14.01□□□□□ -0.17
UPK1AO00322 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK1AO00322 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 SALL4P5-201ENST00000419001 1760 ntBASIC14.01□□□□□ -0.17
UPK1AO00322 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
UPK1AO00322 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14□□□□□ -0.17
UPK1AO00322 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14□□□□□ -0.17
UPK1AO00322 TLE1P1-201ENST00000422965 589 ntBASIC14□□□□□ -0.17
UPK1AO00322 AC007969.1-201ENST00000433675 447 ntBASIC14□□□□□ -0.17
UPK1AO00322 AC245100.3-201ENST00000441281 285 ntBASIC14□□□□□ -0.17
UPK1AO00322 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14□□□□□ -0.17
UPK1AO00322 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14□□□□□ -0.17
UPK1AO00322 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14□□□□□ -0.17
UPK1AO00322 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14□□□□□ -0.17
UPK1AO00322 AC106760.1-201ENST00000508690 800 ntBASIC14□□□□□ -0.17
UPK1AO00322 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14□□□□□ -0.17
UPK1AO00322 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14□□□□□ -0.17
UPK1AO00322 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
UPK1AO00322 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14□□□□□ -0.17
UPK1AO00322 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK1AO00322 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1AO00322 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 TCAM1P-207ENST00000485295 1537 ntBASIC14□□□□□ -0.17
UPK1AO00322 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14□□□□□ -0.17
UPK1AO00322 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms