Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 CR383656.2-201ENST00000548656 2254 ntBASIC10.86□□□□□ -0.67
SMKR1H3BMG3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.86□□□□□ -0.67
SMKR1H3BMG3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AC072061.1-201ENST00000569710 2234 ntBASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AL157996.1-201ENST00000624684 2299 ntBASIC10.85□□□□□ -0.67
SMKR1H3BMG3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 KRT18P43-201ENST00000469825 1281 ntBASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AC003101.2-201ENST00000612557 442 ntBASIC10.85□□□□□ -0.67
SMKR1H3BMG3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.85□□□□□ -0.67
SMKR1H3BMG3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 HSPA8P5-201ENST00000456928 2069 ntBASIC10.85□□□□□ -0.67
SMKR1H3BMG3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMKR1H3BMG3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 AC011498.7-201ENST00000624986 2027 ntBASIC10.84□□□□□ -0.67
SMKR1H3BMG3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SMKR1H3BMG3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms