Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 CICP17-201ENST00000418553 2377 ntBASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AC093433.1-201ENST00000458048 571 ntBASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 RN7SL752P-201ENST00000463779 287 ntBASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 PTP4A1P2-201ENST00000546033 454 ntBASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AC025048.6-201ENST00000634326 1161 ntBASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AC027601.5-201ENST00000624065 2482 ntBASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 AC055811.4-201ENST00000624039 1754 ntBASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 ACTG1P3-201ENST00000431775 1114 ntBASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
HLA-DRB4X5D2U9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms