Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AL096700.1-201ENST00000358001 744 ntBASIC17.71■□□□□ 0.43
RTN4Q9NQC3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AC009947.1-201ENST00000444350 727 ntBASIC17.71■□□□□ 0.43
RTN4Q9NQC3 ZNF90P3-201ENST00000450345 1192 ntBASIC17.71■□□□□ 0.43
RTN4Q9NQC3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AC087272.1-201ENST00000523624 533 ntBASIC17.71■□□□□ 0.43
RTN4Q9NQC3 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 MIR4321-201ENST00000592276 80 ntBASIC17.71■□□□□ 0.43
RTN4Q9NQC3 MIR7706-201ENST00000613747 67 ntBASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AL691432.3-201ENST00000621860 400 ntBASIC17.71■□□□□ 0.43
RTN4Q9NQC3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4Q9NQC3 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RTN4Q9NQC3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC17.71■□□□□ 0.42
RTN4Q9NQC3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC17.71■□□□□ 0.42
RTN4Q9NQC3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RTN4Q9NQC3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC073548.1-201ENST00000624088 1882 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 GPX1P2-201ENST00000429271 606 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 CDK7P1-201ENST00000434574 693 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC098831.1-202ENST00000438821 336 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC079781.3-201ENST00000449110 356 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 UNC93B6-202ENST00000528242 690 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC096734.2-201ENST00000562054 433 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC002347.1-201ENST00000569543 541 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC073575.2-201ENST00000614212 627 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 AC027369.3-201ENST00000530465 3707 ntBASIC17.7■□□□□ 0.42
RTN4Q9NQC3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms