Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 EIF2S2P3-201ENST00000428356 999 ntBASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AC007967.2-201ENST00000432613 625 ntBASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AC092865.6-201ENST00000642101 219 ntBASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.3□□□□□ -0.6
SSBP4Q9BWG4 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AC023794.5-201ENST00000564380 2157 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 SPDYE11-202ENST00000450699 704 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 IGHV3-62-201ENST00000520057 340 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 RARRES2P9-201ENST00000565168 469 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 SPDYE9P-201ENST00000570642 692 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AC015910.1-201ENST00000579400 975 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 SLC25A6P4-201ENST00000586535 553 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AC026120.1-201ENST00000611536 926 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 SPDYE10P-202ENST00000612005 668 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 SPDYE8P-202ENST00000612377 668 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms