Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC093700.1-201ENST00000503348 717 ntBASIC18.87■□□□□ 0.61
ABCA3Q99758 MIR2278-201ENST00000516344 96 ntBASIC18.87■□□□□ 0.61
ABCA3Q99758 AC004923.3-201ENST00000527532 355 ntBASIC18.87■□□□□ 0.61
ABCA3Q99758 RN7SL602P-201ENST00000578326 324 ntBASIC18.87■□□□□ 0.61
ABCA3Q99758 RN7SL718P-201ENST00000581254 303 ntBASIC18.87■□□□□ 0.61
ABCA3Q99758 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC18.87■□□□□ 0.61
ABCA3Q99758 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ABCA3Q99758 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 FAM226B-201ENST00000602508 1490 ntBASIC18.87■□□□□ 0.61
ABCA3Q99758 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
ABCA3Q99758 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCA3Q99758 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCA3Q99758 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 MIR611-201ENST00000384869 67 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ABCA3Q99758 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC18.86■□□□□ 0.61
ABCA3Q99758 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 AC133141.1-201ENST00000443015 339 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 VENTXP4-201ENST00000449029 958 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 KRT8P34-201ENST00000577607 1044 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCA3Q99758 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
ABCA3Q99758 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 TBC1D27-202ENST00000424239 1573 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 MYADML-201ENST00000474610 2147 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 AC079328.2-201ENST00000561241 3354 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ABCA3Q99758 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ABCA3Q99758 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCA3Q99758 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCA3Q99758 AL136084.1-201ENST00000449172 318 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCA3Q99758 RN7SL684P-201ENST00000465665 294 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 RN7SL578P-201ENST00000477781 283 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 RN7SL523P-201ENST00000484401 298 ntBASIC18.86■□□□□ 0.61
ABCA3Q99758 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCA3Q99758 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC18.86■□□□□ 0.61
ABCA3Q99758 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC18.86■□□□□ 0.61
ABCA3Q99758 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC18.86■□□□□ 0.61
ABCA3Q99758 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA3Q99758 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.85■□□□□ 0.61
ABCA3Q99758 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA3Q99758 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ABCA3Q99758 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA3Q99758 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ABCA3Q99758 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA3Q99758 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC18.85■□□□□ 0.61
ABCA3Q99758 AC092910.2-201ENST00000491262 348 ntBASIC18.85■□□□□ 0.61
ABCA3Q99758 AC112250.1-201ENST00000504640 745 ntBASIC18.85■□□□□ 0.61
ABCA3Q99758 TBC1D3P6-201ENST00000505954 962 ntBASIC18.85■□□□□ 0.61
ABCA3Q99758 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA3Q99758 AP003040.1-201ENST00000532044 1024 ntBASIC18.85■□□□□ 0.61
ABCA3Q99758 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA3Q99758 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
ABCA3Q99758 AL162727.3-201ENST00000635661 2787 ntBASIC18.85■□□□□ 0.61
ABCA3Q99758 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 AC018442.1-201ENST00000421439 2061 ntBASIC18.84■□□□□ 0.61
ABCA3Q99758 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCA3Q99758 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 SHMT1P1-201ENST00000419974 1312 ntBASIC18.84■□□□□ 0.61
ABCA3Q99758 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 AC092810.2-201ENST00000431570 362 ntBASIC18.84■□□□□ 0.61
ABCA3Q99758 SNRPD2P2-201ENST00000473818 333 ntBASIC18.84■□□□□ 0.61
ABCA3Q99758 AC132825.4-202ENST00000578792 434 ntBASIC18.84■□□□□ 0.61
ABCA3Q99758 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC18.84■□□□□ 0.61
ABCA3Q99758 AC016582.2-202ENST00000587765 1094 ntBASIC18.84■□□□□ 0.61
ABCA3Q99758 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCA3Q99758 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCA3Q99758 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms