Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NPAS2Q99743 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.55□□□□□ -0.08
NPAS2Q99743 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NPAS2Q99743 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.55□□□□□ -0.08
NPAS2Q99743 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.55□□□□□ -0.08
NPAS2Q99743 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.55□□□□□ -0.08
NPAS2Q99743 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.55□□□□□ -0.08
NPAS2Q99743 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 SAMD11P1-201ENST00000571429 661 ntBASIC14.55□□□□□ -0.08
NPAS2Q99743 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 AC018665.1-201ENST00000622927 1362 ntBASIC14.55□□□□□ -0.08
NPAS2Q99743 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 AC105206.1-202ENST00000314927 2368 ntBASIC14.55□□□□□ -0.08
NPAS2Q99743 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NPAS2Q99743 AC130686.1-201ENST00000622936 2466 ntBASIC14.55□□□□□ -0.08
NPAS2Q99743 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS2Q99743 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NPAS2Q99743 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPAS2Q99743 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 OR8S1-201ENST00000310194 1080 ntBASIC14.54□□□□□ -0.08
NPAS2Q99743 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 TMEM14DP-201ENST00000422205 345 ntBASIC14.54□□□□□ -0.08
NPAS2Q99743 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.54□□□□□ -0.08
NPAS2Q99743 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.54□□□□□ -0.08
NPAS2Q99743 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.54□□□□□ -0.08
NPAS2Q99743 AC036164.1-201ENST00000570544 333 ntBASIC14.54□□□□□ -0.08
NPAS2Q99743 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
NPAS2Q99743 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 AL360270.3-201ENST00000609118 1348 ntBASIC14.54□□□□□ -0.08
NPAS2Q99743 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.54□□□□□ -0.08
NPAS2Q99743 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NPAS2Q99743 AC012617.1-204ENST00000586340 2305 ntBASIC14.54□□□□□ -0.08
NPAS2Q99743 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPAS2Q99743 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms