Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 AL355994.2-201ENST00000447882 704 ntBASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 CICP12-201ENST00000455801 843 ntBASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 AC105233.6-201ENST00000642093 218 ntBASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
PDLIM5Q96HC4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.4□□□□□ -0.11
PDLIM5Q96HC4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PDLIM5Q96HC4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 KRT8P24-201ENST00000560290 1559 ntBASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 HSPA8P5-201ENST00000456928 2069 ntBASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 RPL7P3-201ENST00000441388 714 ntBASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AC005586.2-201ENST00000563946 837 ntBASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AC104506.1-201ENST00000609247 429 ntBASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDLIM5Q96HC4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 AC011474.4-201ENST00000623523 2076 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms