Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AL136309.1-201ENST00000403917 691 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC004945.1-201ENST00000416738 983 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC079178.1-201ENST00000420915 656 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC007969.1-201ENST00000433675 447 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 HIST2H2BB-201ENST00000449108 381 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 RPSAP36-202ENST00000494591 1261 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 MIR4683-201ENST00000579659 81 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 GRK6P1-201ENST00000400595 1711 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 RN7SKP230-201ENST00000365642 335 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 CHMP1AP1-201ENST00000445563 662 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms