Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 AC003686.1-201ENST00000550956 1034 ntBASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE3BQ7Z3V4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AL596257.1-201ENST00000641463 2694 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AC091046.1-201ENST00000331871 207 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AC007274.2-201ENST00000421675 662 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 OR2R1P-201ENST00000441404 914 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AC006335.1-201ENST00000445200 547 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AC079328.1-201ENST00000560358 952 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AL133499.1-201ENST00000596207 608 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AC079336.7-201ENST00000623428 1078 ntBASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE3BQ7Z3V4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 TNRC18P2-201ENST00000417666 2714 ntBASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 AC239868.1-201ENST00000369385 493 ntBASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 AC016629.1-201ENST00000596579 586 ntBASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 MEG3_2.1-201ENST00000611456 105 ntBASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
UBE3BQ7Z3V4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms