Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 RPL17P45-201ENST00000586289 509 ntBASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 AC011491.1-203ENST00000637688 543 ntBASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SHROOM1Q2M3G4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 AP002353.1-201ENST00000528257 1599 ntBASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 AP000358.1-201ENST00000456260 156 ntBASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 AC135983.4-201ENST00000564116 1262 ntBASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 MIR3188-201ENST00000583494 85 ntBASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 SIGLEC18P-201ENST00000602271 909 ntBASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 RN7SL736P-201ENST00000613111 269 ntBASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM1Q2M3G4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 AC074138.1-201ENST00000611182 1303 ntBASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 RPSAP15-201ENST00000448168 861 ntBASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 RN7SL277P-201ENST00000481521 288 ntBASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 AC124068.2-201ENST00000569473 1109 ntBASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms