Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC244669.2-201ENST00000612320 853 ntBASIC12.93□□□□□ -0.34
HIST1H3AP68431 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC139749.1-202ENST00000617529 3139 ntBASIC12.93□□□□□ -0.34
HIST1H3AP68431 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.92□□□□□ -0.34
HIST1H3AP68431 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AC078819.1-201ENST00000547454 765 ntBASIC12.92□□□□□ -0.34
HIST1H3AP68431 AC012085.1-201ENST00000548270 765 ntBASIC12.92□□□□□ -0.34
HIST1H3AP68431 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 OR10B1P-201ENST00000601666 907 ntBASIC12.92□□□□□ -0.34
HIST1H3AP68431 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H3AP68431 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H3AP68431 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 AC020910.6-201ENST00000623084 1459 ntBASIC12.91□□□□□ -0.34
HIST1H3AP68431 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms