Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RIPK4P57078 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RIPK4P57078 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.27■□□□□ 0.67
RIPK4P57078 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RIPK4P57078 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RIPK4P57078 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RIPK4P57078 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.26■□□□□ 0.67
RIPK4P57078 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 HLA-J-204ENST00000495278 958 ntBASIC19.26■□□□□ 0.67
RIPK4P57078 AC005740.2-201ENST00000511085 419 ntBASIC19.26■□□□□ 0.67
RIPK4P57078 AC022447.6-201ENST00000515522 438 ntBASIC19.26■□□□□ 0.67
RIPK4P57078 SCARNA21-201ENST00000517026 139 ntBASIC19.26■□□□□ 0.67
RIPK4P57078 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.26■□□□□ 0.67
RIPK4P57078 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RIPK4P57078 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RIPK4P57078 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.26■□□□□ 0.67
RIPK4P57078 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RIPK4P57078 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK4P57078 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.25■□□□□ 0.67
RIPK4P57078 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.25■□□□□ 0.67
RIPK4P57078 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 AC215219.1-201ENST00000400706 1817 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RIPK4P57078 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
RIPK4P57078 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.25■□□□□ 0.67
RIPK4P57078 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 AC144522.1-201ENST00000625111 1658 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 CYP4F23P-201ENST00000593402 1579 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RIPK4P57078 FAM90A7P-201ENST00000382628 1395 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 FAM90A23P-201ENST00000400136 1395 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 AC091804.1-201ENST00000486888 567 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 AC008805.1-201ENST00000590892 364 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 AC090164.2-201ENST00000611487 516 ntBASIC19.25■□□□□ 0.67
RIPK4P57078 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RIPK4P57078 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.25■□□□□ 0.67
RIPK4P57078 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.25■□□□□ 0.67
RIPK4P57078 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RIPK4P57078 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK4P57078 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms