Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGA2P52926 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HMGA2P52926 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HMGA2P52926 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HMGA2P52926 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
HMGA2P52926 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.47□□□□□ -0.25
HMGA2P52926 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGA2P52926 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGA2P52926 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGA2P52926 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGA2P52926 AC093004.1-201ENST00000508850 424 ntBASIC13.47□□□□□ -0.25
HMGA2P52926 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HMGA2P52926 ENPP7P5-201ENST00000541031 1031 ntBASIC13.47□□□□□ -0.25
HMGA2P52926 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGA2P52926 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.47□□□□□ -0.25
HMGA2P52926 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.47□□□□□ -0.25
HMGA2P52926 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGA2P52926 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HMGA2P52926 AC005252.2-201ENST00000624630 1141 ntBASIC13.47□□□□□ -0.25
HMGA2P52926 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGA2P52926 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGA2P52926 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGA2P52926 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGA2P52926 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 SLC7A15P-201ENST00000424028 1363 ntBASIC13.46□□□□□ -0.25
HMGA2P52926 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 NCLP1-201ENST00000445357 1963 ntBASIC13.46□□□□□ -0.25
HMGA2P52926 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 GNAQP1-201ENST00000444815 1067 ntBASIC13.46□□□□□ -0.25
HMGA2P52926 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 AC093726.1-201ENST00000608064 963 ntBASIC13.46□□□□□ -0.25
HMGA2P52926 AC104506.1-201ENST00000609247 429 ntBASIC13.46□□□□□ -0.25
HMGA2P52926 AL390754.1-201ENST00000619088 582 ntBASIC13.46□□□□□ -0.25
HMGA2P52926 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 280.6 ms