Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 ANKRD19P-201ENST00000338192 862 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC6A12P48065 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC6A12P48065 AC112492.5-201ENST00000421897 457 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 HIST2H2BB-201ENST00000449108 381 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 KLF2P4-201ENST00000451959 1225 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 CTBP2P5-201ENST00000454986 1264 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC6A12P48065 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC6A12P48065 AC079316.1-201ENST00000548397 411 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC6A12P48065 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC6A12P48065 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 AL512343.1-201ENST00000605837 169 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 AC008687.7-202ENST00000637404 953 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC6A12P48065 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC6A12P48065 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC6A12P48065 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC6A12P48065 HSPA8P5-201ENST00000456928 2069 ntBASIC14.21□□□□□ -0.13
SLC6A12P48065 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 CICP16-201ENST00000502609 2813 ntBASIC14.21□□□□□ -0.13
SLC6A12P48065 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC6A12P48065 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 MIR326-201ENST00000362220 95 ntBASIC14.21□□□□□ -0.13
SLC6A12P48065 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.21□□□□□ -0.13
SLC6A12P48065 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC6A12P48065 HOMER2P2-201ENST00000451621 847 ntBASIC14.21□□□□□ -0.13
SLC6A12P48065 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC6A12P48065 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC6A12P48065 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC6A12P48065 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 AP006547.1-201ENST00000563435 692 ntBASIC14.21□□□□□ -0.13
SLC6A12P48065 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 AL136301.1-201ENST00000615830 422 ntBASIC14.21□□□□□ -0.13
SLC6A12P48065 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC6A12P48065 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC6A12P48065 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SLC6A12P48065 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SLC6A12P48065 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC6A12P48065 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC6A12P48065 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC6A12P48065 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.21□□□□□ -0.14
SLC6A12P48065 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SLC6A12P48065 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms