Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 PGAM1P12-201ENST00000505622 748 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.91□□□□□ -0.34
COL8A1P27658 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.91□□□□□ -0.34
COL8A1P27658 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
COL8A1P27658 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COL8A1P27658 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
COL8A1P27658 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.91□□□□□ -0.34
COL8A1P27658 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A1P27658 MIR5001-201ENST00000580185 100 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 FTLP5-201ENST00000586853 534 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A1P27658 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.91□□□□□ -0.34
COL8A1P27658 AC009884.2-201ENST00000603110 324 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 AC011471.3-201ENST00000623576 402 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 AQP7P3-201ENST00000624547 1041 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 AL603764.1-201ENST00000636452 321 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 AC011840.2-201ENST00000563063 1520 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
COL8A1P27658 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 OR2I1P-210ENST00000642037 4691 ntBASIC12.91□□□□□ -0.34
COL8A1P27658 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A1P27658 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A1P27658 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
COL8A1P27658 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
COL8A1P27658 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A1P27658 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
COL8A1P27658 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A1P27658 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.9□□□□□ -0.34
COL8A1P27658 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A1P27658 AC011477.6-201ENST00000604980 1927 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.9□□□□□ -0.34
COL8A1P27658 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A1P27658 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
COL8A1P27658 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COL8A1P27658 HNRNPA1P58-201ENST00000403629 610 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.9□□□□□ -0.34
COL8A1P27658 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
COL8A1P27658 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A1P27658 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 DUTP3-201ENST00000450025 415 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 IGHEP1-201ENST00000521393 651 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 AC006518.1-201ENST00000541449 943 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.9□□□□□ -0.34
COL8A1P27658 DUX4L47-201ENST00000566374 394 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 AC055811.3-201ENST00000584952 686 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 PEBP1P2-201ENST00000603980 558 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 AC012073.1-201ENST00000606114 1108 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 AP001184.1-201ENST00000637936 376 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 LINC01165-201ENST00000445190 1623 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 MYO15B-237ENST00000642007 4893 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 AL157414.3-201ENST00000624276 1954 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A21P-201ENST00000510875 1396 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A15P-201ENST00000514465 1395 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A6P-201ENST00000515148 1394 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A16P-201ENST00000526662 1395 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A9P-201ENST00000527940 1395 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A5P-201ENST00000528738 1395 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A14P-201ENST00000530386 1395 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 FAM90A13P-201ENST00000534703 1395 ntBASIC12.9□□□□□ -0.34
COL8A1P27658 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.9□□□□□ -0.34
COL8A1P27658 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
COL8A1P27658 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A1P27658 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
COL8A1P27658 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
COL8A1P27658 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A1P27658 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A1P27658 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A1P27658 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
COL8A1P27658 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
COL8A1P27658 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A1P27658 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms