Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.07■□□□□ 0
PTPN3P26045 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.07■□□□□ 0
PTPN3P26045 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.07■□□□□ 0
PTPN3P26045 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.07■□□□□ 0
PTPN3P26045 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.07■□□□□ 0
PTPN3P26045 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.07■□□□□ 0
PTPN3P26045 COX5BP1-201ENST00000507622 393 ntBASIC15.07■□□□□ 0
PTPN3P26045 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.07■□□□□ 0
PTPN3P26045 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.07■□□□□ 0
PTPN3P26045 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 RN7SL713P-201ENST00000582127 302 ntBASIC15.07■□□□□ 0
PTPN3P26045 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.07■□□□□ 0
PTPN3P26045 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.07■□□□□ 0
PTPN3P26045 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.07■□□□□ 0
PTPN3P26045 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.07■□□□□ 0
PTPN3P26045 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.07■□□□□ 0
PTPN3P26045 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN3P26045 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.07■□□□□ 0
PTPN3P26045 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 GRK6P1-201ENST00000400595 1711 ntBASIC15.06■□□□□ 0
PTPN3P26045 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.06■□□□□ 0
PTPN3P26045 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PTPN3P26045 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PTPN3P26045 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.06■□□□□ 0
PTPN3P26045 MIR1202-201ENST00000408529 83 ntBASIC15.06■□□□□ 0
PTPN3P26045 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.06■□□□□ 0
PTPN3P26045 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.06■□□□□ 0
PTPN3P26045 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.06■□□□□ 0
PTPN3P26045 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.06■□□□□ 0
PTPN3P26045 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.06■□□□□ 0
PTPN3P26045 AP000812.2-201ENST00000538934 718 ntBASIC15.06■□□□□ 0
PTPN3P26045 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.06■□□□□ 0
PTPN3P26045 MIR6074-201ENST00000612054 107 ntBASIC15.06■□□□□ 0
PTPN3P26045 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 AC136759.1-202ENST00000530858 2194 ntBASIC15.06■□□□□ 0
PTPN3P26045 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 PDIA3P1-201ENST00000471856 1510 ntBASIC15.06■□□□□ 0
PTPN3P26045 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms