Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.48□□□□□ -0.09
CDH1P12830 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH1P12830 ECM1P1-201ENST00000604092 1279 ntBASIC14.48□□□□□ -0.09
CDH1P12830 AC244669.2-201ENST00000612320 853 ntBASIC14.48□□□□□ -0.09
CDH1P12830 AL035252.4-201ENST00000624174 288 ntBASIC14.48□□□□□ -0.09
CDH1P12830 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH1P12830 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDH1P12830 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH1P12830 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH1P12830 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 CLUHP2-201ENST00000426660 1303 ntBASIC14.47□□□□□ -0.09
CDH1P12830 MBLAC2-202ENST00000514906 1936 ntBASIC14.47□□□□□ -0.09
CDH1P12830 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 TPM3P8-201ENST00000330554 643 ntBASIC14.47□□□□□ -0.09
CDH1P12830 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH1P12830 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 POM121L8P-201ENST00000417732 1281 ntBASIC14.47□□□□□ -0.09
CDH1P12830 POM121L9P-203ENST00000441984 1285 ntBASIC14.47□□□□□ -0.09
CDH1P12830 AL590640.2-201ENST00000457038 527 ntBASIC14.47□□□□□ -0.09
CDH1P12830 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH1P12830 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH1P12830 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 RN7SL48P-201ENST00000579283 293 ntBASIC14.47□□□□□ -0.09
CDH1P12830 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH1P12830 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH1P12830 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH1P12830 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH1P12830 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH1P12830 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDH1P12830 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 AC007969.1-201ENST00000433675 447 ntBASIC14.46□□□□□ -0.09
CDH1P12830 KRT43P-201ENST00000434019 910 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms