Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 OR2I1P-208ENST00000641137 4948 ntBASIC13.37□□□□□ -0.27
HLA-DQA2P01906 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 SOCS2P1-201ENST00000417727 557 ntBASIC13.37□□□□□ -0.27
HLA-DQA2P01906 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 SPDYE22P-201ENST00000582158 798 ntBASIC13.37□□□□□ -0.27
HLA-DQA2P01906 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 BRI3BPP1-201ENST00000594224 787 ntBASIC13.37□□□□□ -0.27
HLA-DQA2P01906 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 LRRC59-203ENST00000576448 1531 ntBASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PCDHA5-203ENST00000614258 4248 ntBASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AL139094.1-201ENST00000405549 1188 ntBASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AC022616.1-201ENST00000518688 554 ntBASIC13.36□□□□□ -0.27
HLA-DQA2P01906 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AC093726.1-201ENST00000608064 963 ntBASIC13.36□□□□□ -0.27
HLA-DQA2P01906 AC009118.2-201ENST00000613275 655 ntBASIC13.36□□□□□ -0.27
HLA-DQA2P01906 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA2P01906 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms