Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 VENTXP3-201ENST00000546480 773 ntBASIC16.55■□□□□ 0.24
ALDH1A1P00352 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 AC004686.1-201ENST00000605113 538 ntBASIC16.55■□□□□ 0.24
ALDH1A1P00352 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 PRORSD1P-202ENST00000563365 2154 ntBASIC16.55■□□□□ 0.24
ALDH1A1P00352 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 RN7SL375P-201ENST00000492442 298 ntBASIC16.54■□□□□ 0.24
ALDH1A1P00352 BCL2L12P1-201ENST00000508390 733 ntBASIC16.54■□□□□ 0.24
ALDH1A1P00352 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 RN7SL121P-201ENST00000584223 273 ntBASIC16.54■□□□□ 0.24
ALDH1A1P00352 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.54■□□□□ 0.24
ALDH1A1P00352 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 AD000864.1-201ENST00000624076 2295 ntBASIC16.54■□□□□ 0.24
ALDH1A1P00352 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ALDH1A1P00352 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ALDH1A1P00352 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
ALDH1A1P00352 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 SSR4P1-203ENST00000599569 2260 ntBASIC16.53■□□□□ 0.24
ALDH1A1P00352 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.53■□□□□ 0.24
ALDH1A1P00352 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 OR7E115P-201ENST00000382617 1024 ntBASIC16.53■□□□□ 0.24
ALDH1A1P00352 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 RN7SL288P-201ENST00000490496 291 ntBASIC16.53■□□□□ 0.24
ALDH1A1P00352 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 AC005777.1-201ENST00000588332 187 ntBASIC16.53■□□□□ 0.24
ALDH1A1P00352 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms