Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.63■□□□□ 0.09
RTN3O95197 AC131206.1-201ENST00000538078 1211 ntBASIC15.63■□□□□ 0.09
RTN3O95197 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RTN3O95197 AC007663.3-201ENST00000609632 465 ntBASIC15.63■□□□□ 0.09
RTN3O95197 MIR6787-201ENST00000616675 61 ntBASIC15.63■□□□□ 0.09
RTN3O95197 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.63■□□□□ 0.09
RTN3O95197 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.63■□□□□ 0.09
RTN3O95197 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.63■□□□□ 0.09
RTN3O95197 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTN3O95197 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTN3O95197 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.63■□□□□ 0.09
RTN3O95197 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RTN3O95197 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RTN3O95197 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RTN3O95197 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RTN3O95197 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTN3O95197 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTN3O95197 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RTN3O95197 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RTN3O95197 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 AC091951.1-201ENST00000512854 2465 ntBASIC15.62■□□□□ 0.09
RTN3O95197 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 GPAA1P2-201ENST00000417923 928 ntBASIC15.62■□□□□ 0.09
RTN3O95197 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 GCOM2-201ENST00000509133 1104 ntBASIC15.62■□□□□ 0.09
RTN3O95197 AC126915.1-201ENST00000522847 1038 ntBASIC15.62■□□□□ 0.09
RTN3O95197 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 AL023803.2-201ENST00000620080 638 ntBASIC15.62■□□□□ 0.09
RTN3O95197 GPR182-203ENST00000622922 591 ntBASIC15.62■□□□□ 0.09
RTN3O95197 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RTN3O95197 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.62■□□□□ 0.09
RTN3O95197 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.62■□□□□ 0.09
RTN3O95197 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
RTN3O95197 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.62■□□□□ 0.09
RTN3O95197 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTN3O95197 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RTN3O95197 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.61■□□□□ 0.09
RTN3O95197 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.61■□□□□ 0.09
RTN3O95197 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RTN3O95197 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RTN3O95197 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.61■□□□□ 0.09
RTN3O95197 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.61■□□□□ 0.09
RTN3O95197 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.61■□□□□ 0.09
RTN3O95197 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.61■□□□□ 0.09
RTN3O95197 FAM58BP-201ENST00000439056 645 ntBASIC15.61■□□□□ 0.09
RTN3O95197 AC099548.2-209ENST00000480264 625 ntBASIC15.61■□□□□ 0.09
RTN3O95197 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.61■□□□□ 0.09
RTN3O95197 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTN3O95197 DUX4L46-201ENST00000566845 751 ntBASIC15.61■□□□□ 0.09
RTN3O95197 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.61■□□□□ 0.09
RTN3O95197 AC103810.3-201ENST00000583567 96 ntBASIC15.61■□□□□ 0.09
RTN3O95197 AC244093.1-201ENST00000610837 814 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms