Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 BANF1P3-201ENST00000412556 261 ntBASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 MIR4649-201ENST00000582839 64 ntBASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 WASH3P-207ENST00000560956 1394 ntBASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CCDC187A0A096LP49 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 MIR557-201ENST00000385239 98 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 KRT18P36-201ENST00000411618 1276 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 AL807761.2-201ENST00000422849 729 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 AL627422.1-201ENST00000434104 580 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 RPSAP15-201ENST00000448168 861 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 SIGLEC18P-201ENST00000602271 909 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 AC007326.1-201ENST00000604539 458 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 AC009084.3-201ENST00000623356 437 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 AC025271.4-201ENST00000621477 1726 ntBASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC187A0A096LP49 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms