Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 DUX4L47-201ENST00000566374 394 ntBASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TUBB1P2-201ENST00000422712 1306 ntBASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TUBB1P1-201ENST00000503144 1300 ntBASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AL139099.5-201ENST00000635274 300 ntBASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.68□□□□□ -0.22
RPH3AQ9Y2J0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 FGD5P1-202ENST00000614866 2498 ntBASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 AJ011931.1-201ENST00000618749 2492 ntBASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms