Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 MRPL37P1-201ENST00000592451 1337 ntBASIC16.56■□□□□ 0.24
CBX8Q9HC52 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 AC004945.1-201ENST00000416738 983 ntBASIC16.56■□□□□ 0.24
CBX8Q9HC52 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 AC112482.1-201ENST00000492080 688 ntBASIC16.56■□□□□ 0.24
CBX8Q9HC52 AC027369.6-201ENST00000525520 931 ntBASIC16.56■□□□□ 0.24
CBX8Q9HC52 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 AL049840.4-201ENST00000602422 811 ntBASIC16.56■□□□□ 0.24
CBX8Q9HC52 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 NUS1P3-201ENST00000423502 862 ntBASIC16.55■□□□□ 0.24
CBX8Q9HC52 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC007969.1-201ENST00000433675 447 ntBASIC16.55■□□□□ 0.24
CBX8Q9HC52 VDAC1P7-201ENST00000462417 847 ntBASIC16.55■□□□□ 0.24
CBX8Q9HC52 FAM86LP-201ENST00000478302 853 ntBASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC109322.1-201ENST00000524499 1264 ntBASIC16.55■□□□□ 0.24
CBX8Q9HC52 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC010327.4-202ENST00000591484 748 ntBASIC16.55■□□□□ 0.24
CBX8Q9HC52 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CBX8Q9HC52 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX8Q9HC52 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms