Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 AC117489.1-201ENST00000625169 3217 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 AC011840.2-201ENST00000563063 1520 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 FXNP2-201ENST00000411625 547 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 AC007274.2-201ENST00000421675 662 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 TMEM198B-204ENST00000484016 896 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 AC131206.1-201ENST00000538078 1211 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 MIR4683-201ENST00000579659 81 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 AC027601.5-201ENST00000624065 2482 ntBASIC17.87■□□□□ 0.45
RPAP1Q9BWH6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AC009093.2-202ENST00000620513 2079 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AC005840.4-201ENST00000541242 2494 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 ACTG1P2-201ENST00000415776 1125 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 HINT2P1-201ENST00000419438 481 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 ACTG1P11-201ENST00000425411 1125 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 TPT1P11-201ENST00000458482 498 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AC002472.3-201ENST00000640124 621 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 AC068587.8-201ENST00000641239 219 ntBASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPAP1Q9BWH6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AC015802.1-201ENST00000588104 1449 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AL133466.1-201ENST00000447582 150 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AC021723.1-201ENST00000486306 515 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AL161670.2-201ENST00000557650 1227 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 FGFR3P5-201ENST00000564496 886 ntBASIC17.85■□□□□ 0.45
RPAP1Q9BWH6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms