Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 AC005229.1-201ENST00000392885 409 ntBASIC13.2□□□□□ -0.3
VRK1Q99986 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
VRK1Q99986 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.2□□□□□ -0.3
VRK1Q99986 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.2□□□□□ -0.3
VRK1Q99986 AC026410.3-201ENST00000514280 936 ntBASIC13.2□□□□□ -0.3
VRK1Q99986 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
VRK1Q99986 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VRK1Q99986 SNX29P1-201ENST00000548357 1007 ntBASIC13.2□□□□□ -0.3
VRK1Q99986 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
VRK1Q99986 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.2□□□□□ -0.3
VRK1Q99986 CLUHP6-201ENST00000580789 941 ntBASIC13.2□□□□□ -0.3
VRK1Q99986 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.2□□□□□ -0.3
VRK1Q99986 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VRK1Q99986 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.2□□□□□ -0.3
VRK1Q99986 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.2□□□□□ -0.3
VRK1Q99986 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 AC027601.5-201ENST00000624065 2482 ntBASIC13.19□□□□□ -0.3
VRK1Q99986 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 AL928921.2-201ENST00000641325 2442 ntBASIC13.19□□□□□ -0.3
VRK1Q99986 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 AP001889.1-201ENST00000525414 633 ntBASIC13.19□□□□□ -0.3
VRK1Q99986 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.19□□□□□ -0.3
VRK1Q99986 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.19□□□□□ -0.3
VRK1Q99986 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.19□□□□□ -0.3
VRK1Q99986 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.19□□□□□ -0.3
VRK1Q99986 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.19□□□□□ -0.3
VRK1Q99986 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 AC005252.2-201ENST00000624630 1141 ntBASIC13.19□□□□□ -0.3
VRK1Q99986 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.19□□□□□ -0.3
VRK1Q99986 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VRK1Q99986 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VRK1Q99986 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.19□□□□□ -0.3
VRK1Q99986 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.19□□□□□ -0.3
VRK1Q99986 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VRK1Q99986 CICP17-201ENST00000418553 2377 ntBASIC13.18□□□□□ -0.3
VRK1Q99986 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.18□□□□□ -0.3
VRK1Q99986 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms