Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 AC092364.2-202ENST00000597012 1073 ntBASIC12.07□□□□□ -0.48
RAB40CQ96S21 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 AC004835.2-201ENST00000603762 682 ntBASIC12.07□□□□□ -0.48
RAB40CQ96S21 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 CLK3P2-201ENST00000427566 1453 ntBASIC12.07□□□□□ -0.48
RAB40CQ96S21 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 HLA-K-203ENST00000430151 1046 ntBASIC12.06□□□□□ -0.48
RAB40CQ96S21 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.06□□□□□ -0.48
RAB40CQ96S21 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
RAB40CQ96S21 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 KRT8P35-201ENST00000483942 1338 ntBASIC12.06□□□□□ -0.48
RAB40CQ96S21 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB40CQ96S21 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms