Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13□□□□□ -0.33
CPEB3Q8NE35 AC113367.3-201ENST00000508316 1912 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13□□□□□ -0.33
CPEB3Q8NE35 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13□□□□□ -0.33
CPEB3Q8NE35 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CPEB3Q8NE35 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13□□□□□ -0.33
CPEB3Q8NE35 OR8S1-201ENST00000310194 1080 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 AC006001.1-201ENST00000325130 474 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13□□□□□ -0.33
CPEB3Q8NE35 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13□□□□□ -0.33
CPEB3Q8NE35 CD8B2-202ENST00000417670 633 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 RPL7P3-201ENST00000441388 714 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13□□□□□ -0.33
CPEB3Q8NE35 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13□□□□□ -0.33
CPEB3Q8NE35 AP000812.2-201ENST00000538934 718 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13□□□□□ -0.33
CPEB3Q8NE35 AC106820.3-201ENST00000561653 397 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13□□□□□ -0.33
CPEB3Q8NE35 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13□□□□□ -0.33
CPEB3Q8NE35 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CPEB3Q8NE35 AC017083.2-201ENST00000608069 979 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CPEB3Q8NE35 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 AC097359.2-201ENST00000604992 2389 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 CR383656.2-201ENST00000548656 2254 ntBASIC13□□□□□ -0.33
CPEB3Q8NE35 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13□□□□□ -0.33
CPEB3Q8NE35 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13□□□□□ -0.33
CPEB3Q8NE35 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13□□□□□ -0.33
CPEB3Q8NE35 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CPEB3Q8NE35 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13□□□□□ -0.33
CPEB3Q8NE35 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CPEB3Q8NE35 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AC015656.1-201ENST00000624209 3578 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AP000593.2-201ENST00000542775 1433 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 FAM8A4P-201ENST00000435433 1213 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AP003171.2-201ENST00000528208 925 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AC131206.1-201ENST00000538078 1211 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 OR10B1P-201ENST00000601666 907 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AC009093.2-202ENST00000620513 2079 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AL354702.1-201ENST00000442006 1960 ntBASIC12.99□□□□□ -0.33
CPEB3Q8NE35 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CPEB3Q8NE35 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms