Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 TBC1D3J-201ENST00000620719 1426 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC078991.1-201ENST00000437297 610 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 RPL7P35-201ENST00000446943 740 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 RCC2P8-201ENST00000502779 1035 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 MIR4754-201ENST00000582477 89 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC103810.10-201ENST00000606504 343 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC051619.9-201ENST00000623237 597 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AL645728.2-202ENST00000641679 227 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AP002414.2-201ENST00000591780 3365 ntBASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 FKBP4P6-201ENST00000457486 1332 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AL160314.3-201ENST00000556041 767 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AL031713.1-201ENST00000564813 661 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AC132192.2-201ENST00000596206 1147 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AC087045.2-201ENST00000606279 1003 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AC092171.5-201ENST00000608012 942 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AC009084.3-201ENST00000623356 437 ntBASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms