Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AL096828.3-201ENST00000615354 462 ntBASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AC244394.1-201ENST00000435000 1665 ntBASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 AC009093.10-201ENST00000641956 1442 ntBASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
ZIC4Q8N9L1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 BTBD6P1-201ENST00000412176 1267 ntBASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AL591846.1-201ENST00000451736 433 ntBASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 MIR6074-201ENST00000612054 107 ntBASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC4Q8N9L1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms