Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SIX5Q8N196 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AL583805.1-201ENST00000391389 531 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.2■□□□□ 0.02
SIX5Q8N196 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC130709.1-201ENST00000484779 1212 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 AC010234.1-201ENST00000494599 870 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AP003398.1-201ENST00000531124 318 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC008825.2-201ENST00000603374 718 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 MEG3_2.1-201ENST00000611456 105 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 MIR6720-201ENST00000611664 98 ntBASIC15.2■□□□□ 0.02
SIX5Q8N196 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.2■□□□□ 0.02
SIX5Q8N196 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SIX5Q8N196 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 AL360270.3-201ENST00000609118 1348 ntBASIC15.19■□□□□ 0.02
SIX5Q8N196 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SIX5Q8N196 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SIX5Q8N196 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
SIX5Q8N196 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
SIX5Q8N196 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX5Q8N196 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.19■□□□□ 0.02
SIX5Q8N196 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.19■□□□□ 0.02
SIX5Q8N196 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX5Q8N196 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 AP000358.1-201ENST00000456260 156 ntBASIC15.19■□□□□ 0.02
SIX5Q8N196 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX5Q8N196 AC087392.5-201ENST00000612517 489 ntBASIC15.19■□□□□ 0.02
SIX5Q8N196 AC138466.4-201ENST00000623965 852 ntBASIC15.19■□□□□ 0.02
SIX5Q8N196 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX5Q8N196 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX5Q8N196 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX5Q8N196 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIX5Q8N196 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SIX5Q8N196 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX5Q8N196 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX5Q8N196 AL137783.1-201ENST00000623494 1896 ntBASIC15.18■□□□□ 0.02
SIX5Q8N196 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX5Q8N196 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX5Q8N196 AC079781.5-202ENST00000641784 3743 ntBASIC15.18■□□□□ 0.02
SIX5Q8N196 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SIX5Q8N196 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX5Q8N196 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SIX5Q8N196 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms