Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 AC003102.2-201ENST00000589195 1469 ntBASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 AL603764.1-201ENST00000636452 321 ntBASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00346Q8IVM7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ACKR1-201ENST00000368121 1240 ntBASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 DGCR5-201ENST00000399539 862 ntBASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC022137.2-201ENST00000503482 481 ntBASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC138761.1-201ENST00000584393 385 ntBASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AL355385.1-201ENST00000606123 409 ntBASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms