Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AC136604.1-201ENST00000418535 575 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AL442647.2-201ENST00000429864 857 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AL355864.2-201ENST00000447420 863 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 RN7SL399P-201ENST00000471648 279 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 RN7SL560P-201ENST00000577943 264 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AC135178.5-201ENST00000602597 674 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AC090953.1-201ENST00000604305 1092 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AC090246.1-201ENST00000616499 426 ntBASIC12.33□□□□□ -0.44
TREML4Q6UXN2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 AC041040.2-201ENST00000622926 2899 ntBASIC12.32□□□□□ -0.44
TREML4Q6UXN2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 CALR4P-201ENST00000431943 946 ntBASIC12.32□□□□□ -0.44
TREML4Q6UXN2 USP9YP28-201ENST00000435142 589 ntBASIC12.32□□□□□ -0.44
TREML4Q6UXN2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 EAF2-202ENST00000451944 960 ntTSL 2 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 MTND2P39-201ENST00000457230 764 ntBASIC12.32□□□□□ -0.44
TREML4Q6UXN2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.32□□□□□ -0.44
TREML4Q6UXN2 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms