Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AC022080.1-201ENST00000366255 781 ntBASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 ACTBP7-201ENST00000418351 1124 ntBASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AGPAT5P1-201ENST00000455855 1019 ntBASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 BPIFB5P-201ENST00000457066 1099 ntBASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 PFN2-212ENST00000490975 858 ntTSL 4 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AL031673.1-201ENST00000611460 466 ntBASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 AC023157.3-201ENST00000619086 2088 ntBASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 PIFO-201ENST00000369737 746 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 AL512599.1-201ENST00000430724 685 ntBASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 RBM4-207ENST00000506523 654 ntTSL 3 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 DUT-208ENST00000559540 1441 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDC42BPAQ5VT25 SHMT1P1-201ENST00000419974 1312 ntBASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 PRSS3P1-201ENST00000503996 742 ntBASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 ABHD17AP9-201ENST00000561925 548 ntBASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 AP003392.6-201ENST00000607709 325 ntBASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 RNF146-211ENST00000609447 607 ntTSL 4 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 GSN-209ENST00000449733 2702 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42BPAQ5VT25 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 CYP4F36P-201ENST00000589193 186 ntBASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AL136982.5-201ENST00000605222 294 ntBASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms