Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AC012618.1-201ENST00000461223 412 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AC082651.2-201ENST00000496833 166 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 NUP210P1-202ENST00000504322 710 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 AC118465.1-201ENST00000513820 1271 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AL161670.2-201ENST00000557650 1227 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AL136172.1-201ENST00000598590 1394 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AGAP7P-201ENST00000582299 2062 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 AGAP14-201ENST00000624701 2060 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 MIR33B-201ENST00000385104 96 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 AC013410.2-201ENST00000422627 201 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 MAGEA5-201ENST00000446757 942 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 AC117500.1-201ENST00000497352 755 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 FGFR3P5-201ENST00000564496 886 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 AC024933.1-201ENST00000608472 348 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 AL157392.4-201ENST00000609756 345 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 NAP1L6-202ENST00000641404 1222 ntBASIC15.68■□□□□ 0.1
VARS2Q5ST30 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VARS2Q5ST30 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARS2Q5ST30 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AC144522.1-201ENST00000625111 1658 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARS2Q5ST30 AC104640.1-201ENST00000562617 2109 ntBASIC15.67■□□□□ 0.1
VARS2Q5ST30 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms