Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 AC007686.3-201ENST00000619017 3487 ntBASIC13.16□□□□□ -0.3
NKX6-1P78426 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX6-1P78426 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 AL138709.1-201ENST00000614840 1693 ntBASIC13.15□□□□□ -0.3
NKX6-1P78426 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
NKX6-1P78426 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 AC126365.1-201ENST00000578585 1514 ntBASIC13.15□□□□□ -0.3
NKX6-1P78426 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 MIR663B-201ENST00000408361 115 ntBASIC13.15□□□□□ -0.3
NKX6-1P78426 MIR1202-201ENST00000408529 83 ntBASIC13.15□□□□□ -0.3
NKX6-1P78426 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX6-1P78426 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.15□□□□□ -0.3
NKX6-1P78426 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX6-1P78426 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX6-1P78426 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX6-1P78426 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 AC145423.3-201ENST00000615987 467 ntBASIC13.15□□□□□ -0.3
NKX6-1P78426 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
NKX6-1P78426 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-1P78426 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-1P78426 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-1P78426 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-1P78426 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-1P78426 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
NKX6-1P78426 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-1P78426 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-1P78426 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-1P78426 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-1P78426 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-1P78426 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms