Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC006453.4-201ENST00000636949 1252 ntBASIC12.95□□□□□ -0.34
HIST1H3AP68431 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 RN7SL832P-201ENST00000607781 1756 ntBASIC12.94□□□□□ -0.34
HIST1H3AP68431 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 AC136759.1-202ENST00000530858 2194 ntBASIC12.94□□□□□ -0.34
HIST1H3AP68431 ST20-AS1-201ENST00000560255 4223 ntBASIC12.94□□□□□ -0.34
HIST1H3AP68431 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 NME2P1-201ENST00000426182 414 ntBASIC12.94□□□□□ -0.34
HIST1H3AP68431 FAM197Y7-201ENST00000432892 766 ntBASIC12.94□□□□□ -0.34
HIST1H3AP68431 FAM8A4P-201ENST00000435433 1213 ntBASIC12.94□□□□□ -0.34
HIST1H3AP68431 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HIST1H3AP68431 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.94□□□□□ -0.34
HIST1H3AP68431 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC006001.1-201ENST00000325130 474 ntBASIC12.93□□□□□ -0.34
HIST1H3AP68431 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 ARSEP1-201ENST00000420443 635 ntBASIC12.93□□□□□ -0.34
HIST1H3AP68431 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AL590640.2-201ENST00000457038 527 ntBASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC007551.1-201ENST00000457394 519 ntBASIC12.93□□□□□ -0.34
HIST1H3AP68431 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 KRT90P-201ENST00000549264 1064 ntBASIC12.93□□□□□ -0.34
HIST1H3AP68431 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HIST1H3AP68431 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms